Models, Genetic; Transcription Factors; Histones; Epigenesis, Genetic; Deoxyribonuclease I
RPI-Bind: a structure-based method for accurate identification of RNA-protein binding sites. Luo J, Liu L, Venkateswaran S, Song Q, Zhou X.. Sci Rep. 2017;7(1):614.
Annotating function to differentially expressed LincRNAs in myelodysplastic syndrome using a network-based method. Liu K, Beck D, Thoms JAI, Liu L, Zhao W, Pimanda JE, Zhou X.. Bioinformatics. 2017;():.
RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information. Suresh V, Liu L, Adjeroh D, Zhou X.. Nucleic Acids Res. 2015;43(3):1370-1379.
Modeling the relationship of epigenetic modifications to transcription factor binding. Liu L, Jin G, Zhou X.. Nucleic Acids Res. 2015;43(8):3873-3885.
Analysis of DNA methylation and gene expression in radiation-resistant head and neck tumors. Chen X, Liu L, Mims J, Punska EC, Williams KE, Zhao W, Arcaro KF, Tsang AW, Zhou X, Furdui CM.. Epigenetics. 2015;10(6):545-561.
Mutated genes and driver pathways involved in myelodysplastic syndromes-a transcriptome sequencing based approach. Liu L, Wang H, Wen J, Tseng CE, Zu Y, Chang CC, Zhou X.. Mol Biosyst. 2015;11(8):2158-2166.
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