Genetic Analysis Resources in the Center for Public Health Genomics

Genetics Software Downloads
Genetic software is now hosted on GitHub, and can be found at the following links:

SNPLASH (includes SNPGWA; QSNPGWA ; Dandelion; MECPM, BADTree)

SNPDoc searches public databases for biologic information on single nucleotide polymorphisms (SNPs). Information retrieved includes chromosome, physical position (bases), gene (nearest gene(s)), alias(es), risk score (fastsnp_reference pdf), and SNP function. Information is stored in a SQL database and periodically updated. SNPDoc is also available as an executable that includes a few extra features, including linkage disequilibrium results and the ability to input genetic regions or positions. 

ContactDr. Carl D. Langefeld, Dr. David McWilliams, and John Beal.

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Last Updated: 08-26-2016
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Disclaimer: The information on this website is for general informational purposes only and SHOULD NOT be relied upon as a substitute for sound professional medical advice, evaluation or care from your physician or other qualified health care provider.